Gene details

Annotation of co-expression genes

PH01002851G0050's details annotation

1.Annotation

ICBR annotation: threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed

Blast result AT3G10050 : 0.00E+00
Blast annotation: L-O-methylthreonine resistant 1

2.Location

Scaffold: PH01002851
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001120	Valine,_leucine_and_isoleucine_biosynthesis Glycine,_serine_and_threonine_metabolism isoleucine biosynthetic process, L-threonine ammonia-lyase activity, cellular amino acid metabolic process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
311 Glycine, serine and threonine metabolism	threonine dehydratase [EC:4.3.1.19]		K01754
00290 Valine, leucine and isoleucine biosynthesis	threonine dehydratase [EC:4.3.1.19]		K01754

10.Gene Ontology

GO Accession	GO Annotation
GO:0004794	L-threonine ammonia-lyase activity
GO:0006520	cellular amino acid metabolic process
GO:0009097	isoleucine biosynthetic process
GO:0030170	pyridoxal phosphate binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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