PH01002874G0050's details annotation
1.Annotation
ICBR annotation: peptidase, trypsin-like serine and cysteine proteases, putative, expressed
Blast result AT2G35155 : 0.00E+00
Blast annotation: Trypsin family protein
2.Location
Scaffold: PH01002874
Strand: -
| Region | Start | End |
| gene | 20530 | 26121 |
| mRNA | 20530 | 26121 |
| exon | 20530 | 21535 |
| exon | 21815 | 22315 |
| exon | 22732 | 22972 |
| exon | 23326 | 23412 |
| exon | 23673 | 23816 |
| exon | 23914 | 26121 |
| CDS | 21180 | 21535 |
| CDS | 21815 | 22315 |
| CDS | 22732 | 22972 |
| CDS | 23326 | 23412 |
| CDS | 23673 | 23816 |
| CDS | 23914 | 24396 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.