Gene details

Annotation of co-expression genes

PH01002962G0030's details annotation

1.Annotation

ICBR annotation: superoxide dismutase, mitochondrial precursor, putative, expressed

Blast result AT3G10920 : 1.00E-101
Blast annotation: manganese superoxide dismutase 1

2.Location

Scaffold: PH01002962
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000237	solute:hydrogen antiporter activity,
coexpression network	CFinderM001247	CAMTA Transcription_Regulator(from PlantTFDB) superoxide metabolic process, Peroxisome Protein_export superoxide dismutase activity,
coexpression network	CFinderM001447	superoxide metabolic process, superoxide dismutase activity, Peroxisome

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Peroxisome	superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	ko04146	K04564

10.Gene Ontology

GO Accession	GO Annotation
GO:0004784	superoxide dismutase activity
GO:0006801	superoxide metabolic process
GO:0046872	metal ion binding
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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