PH01002968G0170's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein
Blast result AT1G13820 : 7.20E-17
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01002968
Strand: +
| Region | Start | End |
| gene | 102047 | 104129 |
| mRNA | 102047 | 104129 |
| exon | 102047 | 102321 |
| exon | 102462 | 102527 |
| exon | 102660 | 104129 |
| CDS | 102262 | 102321 |
| CDS | 102462 | 102527 |
| CDS | 102660 | 102845 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001104 | RLK-Pelle_LRR-VI-2 (from iTAK) GARP-G2-like Transcription_Regulator(from iTAK) G2-like Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.