PH01002968G0190's details annotation
1.Annotation
ICBR annotation: X8 domain containing protein, expressed
Blast result AT5G08000 : 8.60E-36
Blast annotation: glucan endo-1,3-beta-glucosidase-like protein 3
2.Location
Scaffold: PH01002968
Strand: -
| Region | Start | End |
| gene | 118046 | 122282 |
| mRNA | 118046 | 122282 |
| exon | 118046 | 118419 |
| exon | 119317 | 119350 |
| exon | 119923 | 120156 |
| exon | 120957 | 122282 |
| CDS | 118095 | 118419 |
| CDS | 119317 | 119350 |
| CDS | 119923 | 120156 |
| CDS | 120957 | 121014 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate-Binding_Modules | CBM43 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07983.12 | X8 | 21 | 91 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.