PH01003008G0210's details annotation
1.Annotation
ICBR annotation: amidase family protein, putative, expressed
Blast result AT5G64440 : 1.20E-61
Blast annotation: fatty acid amide hydrolase
2.Location
Scaffold: PH01003008
Strand: -
| Region | Start | End |
| gene | 117718 | 127183 |
| mRNA | 117718 | 127183 |
| exon | 117718 | 118104 |
| exon | 118134 | 118198 |
| exon | 118845 | 118913 |
| exon | 119408 | 119511 |
| exon | 119990 | 120073 |
| exon | 120145 | 120225 |
| exon | 120719 | 120770 |
| exon | 121700 | 121847 |
| exon | 121921 | 121998 |
| exon | 122871 | 123000 |
| exon | 123090 | 123385 |
| exon | 124191 | 124239 |
| exon | 125084 | 125135 |
| exon | 126033 | 126300 |
| exon | 126763 | 127183 |
| CDS | 118010 | 118104 |
| CDS | 118134 | 118198 |
| CDS | 118845 | 118913 |
| CDS | 119408 | 119511 |
| CDS | 119990 | 120073 |
| CDS | 120145 | 120225 |
| CDS | 120719 | 120770 |
| CDS | 121700 | 121847 |
| CDS | 121921 | 121998 |
| CDS | 122871 | 123000 |
| CDS | 123090 | 123385 |
| CDS | 124191 | 124239 |
| CDS | 125084 | 125135 |
| CDS | 126033 | 126300 |
| CDS | 126763 | 126898 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01425.20 | Amidase | 289 | 387 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.