PH01003013G0220's details annotation
1.Annotation
ICBR annotation: glutathione S-transferase GSTU6, putative, expressed
Blast result AT1G10360 : 6.40E-52
Blast annotation: glutathione S-transferase TAU 18
2.Location
Scaffold: PH01003013
Strand: -
| Region | Start | End |
| gene | 142622 | 146460 |
| mRNA | 142622 | 146460 |
| exon | 142622 | 145600 |
| exon | 145680 | 145754 |
| exon | 146168 | 146460 |
| CDS | 145175 | 145600 |
| CDS | 145680 | 145754 |
| CDS | 146168 | 146407 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02798.19 | GST_N | 8 | 80 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glutathione metabolism | glutathione S-transferase [EC:2.5.1.18] | ko00480 | K00799 |
| Metabolism of xenobiotics by cytochrome P450 | glutathione S-transferase [EC:2.5.1.18] | ko00980 | K00799 |
| Drug metabolism - cytochrome P450 | glutathione S-transferase [EC:2.5.1.18] | ko00982 | K00799 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.