Annotation of co-expression genes

PH01003063G0040's details annotation

1.Annotation

ICBR annotation: cytidylyltransferase domain containing protein, expressed

Blast result AT2G38670 : 2.00E-176
Blast annotation: phosphorylethanolamine cytidylyltransferase 1

2.Location

Scaffold: PH01003063
Strand: +

RegionStartEnd
gene1665924801
mRNA1665924801
exon1665917288
exon1837718612
exon1913419315
exon2004720118
exon2028820355
exon2082321041
exon2160521725
exon2298923054
exon2313523257
exon2362824801
CDS1695417288
CDS1837718612
CDS1913419315
CDS2004720118
CDS2028820355
CDS2082321041
CDS2160521725
CDS2298923054
CDS2313523257
CDS2362823699

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction details
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF01467.25CTP_transf_like62190
PF01467.25CTP_transf_like261353

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Glycerophospholipid metabolismethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14]ko00564K00967
Phosphonate and phosphinate metabolismethanolamine-phosphate cytidylyltransferase [EC:2.7.7.14]ko00440K00967

10.Gene Ontology

GO AccessionGO Annotation
GO:0003824catalytic activity
GO:0009058biosynthetic process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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