PH01003069G0220's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G01750 : 8.00E-146
Blast annotation: Ankyrin repeat family protein
2.Location
Scaffold: PH01003069
Strand: +
| Region | Start | End |
| gene | 143876 | 150281 |
| mRNA | 143876 | 150281 |
| exon | 143876 | 147087 |
| exon | 147493 | 147594 |
| exon | 147893 | 150281 |
| CDS | 146359 | 147087 |
| CDS | 147493 | 147594 |
| CDS | 147893 | 149146 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000562 | GT4 GlycosylTransferases biosynthetic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13857.5 | Ank_5 | 289 | 337 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.