PH01003084G0170's details annotation
1.Annotation
ICBR annotation: integral membrane protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01003084
Strand: -
| Region | Start | End |
| gene | 123792 | 128745 |
| mRNA | 123792 | 128745 |
| exon | 123792 | 123934 |
| exon | 124045 | 124203 |
| exon | 124666 | 125340 |
| exon | 125649 | 125798 |
| exon | 128450 | 128745 |
| CDS | 123828 | 123934 |
| CDS | 124045 | 124203 |
| CDS | 124666 | 125340 |
| CDS | 125649 | 125798 |
| CDS | 128450 | 128657 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000980 | MYB-related Transcription_Regulator(from iTAK) MYB_related Transcription_Regulator(from PlantTFDB) RLK-Pelle_LRR-Xa (from iTAK) |
| coexpression network | CFinderM001145 | mannose metabolic process, mannosidase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.