PH01003089G0210's details annotation
1.Annotation
ICBR annotation: L-ascorbate oxidase precursor, putative, expressed
Blast result AT5G21105 : 0.00E+00
Blast annotation: Plant L-ascorbate oxidase
2.Location
Scaffold: PH01003089
Strand: -
| Region | Start | End |
| gene | 139670 | 142032 |
| mRNA | 139670 | 142032 |
| exon | 139670 | 142032 |
| CDS | 140413 | 141129 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07732.14 | Cu-oxidase_3 | 34 | 145 |
| PF00394.21 | Cu-oxidase | 162 | 323 |
| PF07731.13 | Cu-oxidase_2 | 432 | 550 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Ascorbate and aldarate metabolism | L-ascorbate oxidase [EC:1.10.3.3] | ko00053 | K00423 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005507 | copper ion binding |
| GO:0005576 | extracellular region |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.