Gene details

Annotation of co-expression genes

PH01003093G0210's details annotation

1.Annotation

ICBR annotation: glycosyl hydrolases family 17, putative, expressed

Blast result AT3G57270 : 6.80E-41
Blast annotation: beta-1,3-glucanase 1

2.Location

Scaffold: PH01003093
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000080	DNA replication, synthesis of RNA primer, CBM43 Carbohydrate-Binding_Modules GH17 Glycoside_Hydrolases DNA primase activity,
coexpression network	CFinderM000081	chromosome, centromeric region, GH17 Glycoside_Hydrolases CBM43 Carbohydrate-Binding_Modules mitosis,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Glycoside_Hydrolases	GH17
Carbohydrate-Binding_Modules	CBM43

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00332.17	Glyco_hydro_17	31	275

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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