PH01003118G0100's details annotation
1.Annotation
ICBR annotation: uncharacterized protein At4g06744 precursor, putative, expressed
Blast result AT4G13340 : 2.40E-99
Blast annotation: Leucine-rich repeat (LRR) family protein
2.Location
Scaffold: PH01003118
Strand: +
| Region | Start | End |
| gene | 87627 | 89890 |
| mRNA | 87627 | 89890 |
| exon | 87627 | 89890 |
| CDS | 87726 | 88889 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13855.5 | LRR_8 | 132 | 188 |
| PF13855.5 | LRR_8 | 275 | 334 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.