PH01003144G0160's details annotation
1.Annotation
ICBR annotation: MEE12, putative, expressed
Blast result AT2G02955 : 8.80E-69
Blast annotation: maternal effect embryo arrest 12
2.Location
Scaffold: PH01003144
Strand: -
| Region | Start | End |
| gene | 138242 | 145296 |
| mRNA | 138242 | 145296 |
| exon | 138242 | 141161 |
| exon | 141665 | 141789 |
| exon | 142872 | 143028 |
| exon | 143112 | 145296 |
| CDS | 140721 | 141161 |
| CDS | 141665 | 141789 |
| CDS | 142872 | 143028 |
| CDS | 143112 | 143606 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000489 | SAGA-type_complex cell death, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.