PH01003145G0100's details annotation
1.Annotation
ICBR annotation: phosphatidylinositol 3- and 4-kinase family protein, putative, expressed
Blast result AT2G46500 : 4.00E-172
Blast annotation: phosphoinositide 4-kinase gamma 4
2.Location
Scaffold: PH01003145
Strand: -
| Region | Start | End |
| gene | 55869 | 58319 |
| mRNA | 55869 | 58319 |
| exon | 55869 | 56565 |
| exon | 56655 | 58319 |
| CDS | 56188 | 56565 |
| CDS | 56655 | 57992 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00240.22 | ubiquitin | 54 | 114 |
| PF00240.22 | ubiquitin | 120 | 193 |
| PF00454.26 | PI3_PI4_kinase | 277 | 518 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.