Gene details

Annotation of co-expression genes

PH01003179G0180's details annotation

1.Annotation

ICBR annotation: nucleolar protein NOP5-1, putative

Blast result AT3G05060 : 0.00E+00
Blast annotation: NOP56-like pre RNA processing ribonucleoprotein

2.Location

Scaffold: PH01003179
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000462	exocyst, microtubule binding, Ribosome_biogenesis_in_eukaryotes microtubule cytoskeleton organization, exocytosis, cytokinesis cellular amino acid metabolic process,
coexpression network	CFinderM000797	threonyl-tRNA aminoacylation, tRNA aminoacylation, microtubule cytoskeleton organization, cytokinesis Aminoacyl-tRNA_biosynthesis Ribosome_biogenesis_in_eukaryotes threonine-tRNA ligase activity, cellular amino acid metabolic process, tRNA aminoacylation for protein translation, ligase activity, forming aminoacyl-tRNA and related compounds, microtubule binding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome biogenesis in eukaryotes	nucleolar protein 58	ko03008	K14565

10.Gene Ontology

GO Accession	GO Annotation
null	null

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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