PH01003208G0220's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G60370 : 1.80E-35
Blast annotation: -
2.Location
Scaffold: PH01003208
Strand: -
| Region | Start | End |
| gene | 138881 | 144754 |
| mRNA | 138881 | 144754 |
| exon | 138881 | 139755 |
| exon | 139921 | 139997 |
| exon | 140234 | 140387 |
| exon | 142300 | 142445 |
| exon | 143019 | 143211 |
| exon | 143849 | 144754 |
| CDS | 139548 | 139755 |
| CDS | 139921 | 139997 |
| CDS | 140234 | 140387 |
| CDS | 142300 | 142445 |
| CDS | 143019 | 143211 |
| CDS | 143849 | 144102 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09810.8 | Exo5 | 260 | 334 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.