PH01003268G0240's details annotation
1.Annotation
ICBR annotation: thioesterase family protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01003268
Strand: +
| Region | Start | End |
| gene | 156051 | 160650 |
| mRNA | 156051 | 160650 |
| exon | 156051 | 157387 |
| exon | 159449 | 159588 |
| exon | 159848 | 159938 |
| exon | 160239 | 160298 |
| exon | 160484 | 160650 |
| CDS | 157211 | 157387 |
| CDS | 159449 | 159588 |
| CDS | 159848 | 159938 |
| CDS | 160239 | 160298 |
| CDS | 160484 | 160492 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000371 | apoplast, lignin catabolic process, hydroquinone:oxygen_oxidoreductase_activity |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.