Annotation of co-expression genes

PH01003286G0210's details annotation

1.Annotation

ICBR annotation: OsWAK13 - OsWAK receptor-like protein kinase, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01003286
Strand: -

RegionStartEnd
gene135418140885
mRNA135418140885
exon135418137257
exon137418137588
exon139740140885
CDS136986137257
CDS137418137588
CDS139740139764

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0005509calcium ion binding
GO:0016772transferase activity, transferring phosphorus-containing groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.