PH01003299G0250's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01003299
Strand: +
| Region | Start | End |
| gene | 144444 | 146776 |
| mRNA | 144444 | 146776 |
| exon | 144444 | 145259 |
| exon | 145599 | 145669 |
| exon | 145749 | 145983 |
| exon | 146101 | 146776 |
| CDS | 145116 | 145259 |
| CDS | 145599 | 145669 |
| CDS | 145749 | 145983 |
| CDS | 146101 | 146292 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001512 | leucyl-tRNA aminoacylation, GT8 GlycosylTransferases leucine-tRNA ligase activity, aminoacyl-tRNA_editing_activity tRNA aminoacylation for protein translation, Starch_and_sucrose_metabolism Amino_sugar_and_nucleotide_sugar_metabolism Aminoacyl-tRNA_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.