PH01003340G0200's details annotation
1.Annotation
ICBR annotation: TOM2B, putative, expressed
Blast result AT1G32370 : 4.70E-09
Blast annotation: tobamovirus multiplication 2B
2.Location
Scaffold: PH01003340
Strand: +
| Region | Start | End |
| gene | 113470 | 116794 |
| mRNA | 113470 | 116794 |
| exon | 113470 | 114420 |
| exon | 115180 | 115245 |
| exon | 115321 | 115385 |
| exon | 115675 | 115739 |
| exon | 116453 | 116794 |
| CDS | 114307 | 114420 |
| CDS | 115180 | 115245 |
| CDS | 115321 | 115385 |
| CDS | 115675 | 115739 |
| CDS | 116453 | 116550 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.