PH01003371G0060's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G59710 : 7.60E-56
Blast annotation: Protein of unknown function (DUF569)
2.Location
Scaffold: PH01003371
Strand: +
| Region | Start | End |
| gene | 61533 | 67052 |
| mRNA | 61533 | 67052 |
| exon | 61533 | 64354 |
| exon | 64495 | 64698 |
| exon | 65424 | 65717 |
| exon | 65868 | 67052 |
| CDS | 64055 | 64354 |
| CDS | 64495 | 64698 |
| CDS | 65424 | 65717 |
| CDS | 65868 | 65981 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04601.12 | DUF569 | 1 | 100 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.