PH01003376G0120's details annotation
1.Annotation
ICBR annotation: cation-transporting ATPase, putative, expressed
Blast result AT5G23630 : 0.00E+00
Blast annotation: phosphate deficiency response 2
2.Location
Scaffold: PH01003376
Strand: -
| Region | Start | End |
| gene | 101498 | 113765 |
| mRNA | 101498 | 113765 |
| exon | 101498 | 103819 |
| exon | 105268 | 105384 |
| exon | 105511 | 105622 |
| exon | 106134 | 106282 |
| exon | 106744 | 106809 |
| exon | 107722 | 107850 |
| exon | 108721 | 108829 |
| exon | 109500 | 109579 |
| exon | 109684 | 109809 |
| exon | 109840 | 109845 |
| exon | 109882 | 109956 |
| exon | 110005 | 110187 |
| exon | 110290 | 110376 |
| exon | 110447 | 110557 |
| exon | 110633 | 110737 |
| exon | 111338 | 111503 |
| exon | 111581 | 111753 |
| exon | 111830 | 111902 |
| exon | 112709 | 112794 |
| exon | 112914 | 112935 |
| exon | 113219 | 113765 |
| CDS | 102743 | 103819 |
| CDS | 105268 | 105384 |
| CDS | 105511 | 105622 |
| CDS | 106134 | 106282 |
| CDS | 106744 | 106809 |
| CDS | 107722 | 107850 |
| CDS | 108721 | 108829 |
| CDS | 109500 | 109579 |
| CDS | 109684 | 109809 |
| CDS | 109840 | 109845 |
| CDS | 109882 | 109956 |
| CDS | 110005 | 110187 |
| CDS | 110290 | 110376 |
| CDS | 110447 | 110557 |
| CDS | 110633 | 110737 |
| CDS | 111338 | 111503 |
| CDS | 111581 | 111753 |
| CDS | 111830 | 111902 |
| CDS | 112709 | 112794 |
| CDS | 112914 | 112935 |
| CDS | 113219 | 113457 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00122.19 | E1-E2_ATPase | 191 | 400 |
| PF13246.5 | Cation_ATPase | 482 | 556 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000166 | nucleotide binding |
| GO:0006812 | cation transport |
| GO:0016021 | integral to membrane |
| GO:0016887 | ATPase activity |
| GO:0019829 | cation-transporting ATPase activity |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.