PH01003431G0100's details annotation
1.Annotation
ICBR annotation: glutathione S-transferase, C-terminal domain containing protein, expressed
Blast result AT2G30870 : 2.60E-26
Blast annotation: glutathione S-transferase PHI 10
2.Location
Scaffold: PH01003431
Strand: +
| Region | Start | End |
| gene | 51839 | 55489 |
| mRNA | 51839 | 55489 |
| exon | 51839 | 52386 |
| exon | 53071 | 54042 |
| exon | 54121 | 55489 |
| CDS | 52212 | 52386 |
| CDS | 53071 | 54042 |
| CDS | 54121 | 54965 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000004 | RLK-Pelle_LRR-XI-1 (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00043.24 | GST_C | 118 | 194 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.