PH01003445G0150's details annotation
1.Annotation
ICBR annotation: wound and phytochrome signaling involved receptor like kinase, putative, expressed
Blast result AT2G16250 : 1.20E-89
Blast annotation: Leucine-rich repeat protein kinase family protein
2.Location
Scaffold: PH01003445
Strand: -
| Region | Start | End |
| gene | 68674 | 75326 |
| mRNA | 68674 | 75326 |
| exon | 68674 | 69667 |
| exon | 69798 | 69820 |
| exon | 70883 | 71011 |
| exon | 72184 | 73269 |
| exon | 73383 | 75326 |
| CDS | 69099 | 69667 |
| CDS | 69798 | 69820 |
| CDS | 70883 | 71011 |
| CDS | 72184 | 73269 |
| CDS | 73383 | 73453 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 268 | 534 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.