Gene details

Annotation of co-expression genes

PH01003455G0230's details annotation

1.Annotation

ICBR annotation: DNA-directed RNA polymerase III subunit RPC9, putative, expressed

Blast result AT5G62950 : 4.90E-27
Blast annotation: RNA polymerase II, Rpb4, core protein

2.Location

Scaffold: PH01003455
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001047	small-subunit processome, mitochondrion, Oxidative_phosphorylation cytochrome-c oxidase activity,
coexpression network	CFinderM001097	cell proliferation, extracellular region, growth factor activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF03874.15	RNA_pol_Rpb4	10	127

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0003824	catalytic activity
GO:0003899	DNA-directed RNA polymerase activity
GO:0006351	transcription, DNA-dependent
GO:0044237	cellular metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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