PH01003477G0120's details annotation
1.Annotation
ICBR annotation: auxin-independent growth promoter protein, putative, expressed
Blast result AT2G03280 : 1.00E-101
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01003477
Strand: +
| Region | Start | End |
| gene | 74346 | 79504 |
| mRNA | 74346 | 79504 |
| exon | 74346 | 75207 |
| exon | 75629 | 75696 |
| exon | 75799 | 75887 |
| exon | 75967 | 76132 |
| exon | 76192 | 76258 |
| exon | 76577 | 76806 |
| exon | 76889 | 77043 |
| exon | 77619 | 79504 |
| CDS | 74973 | 75207 |
| CDS | 75629 | 75696 |
| CDS | 75799 | 75887 |
| CDS | 75967 | 76132 |
| CDS | 76192 | 76258 |
| CDS | 76577 | 76806 |
| CDS | 76889 | 77043 |
| CDS | 77619 | 77862 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 86 | 186 |
| PF10250.8 | O-FucT | 228 | 339 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.