PH01003576G0030's details annotation
1.Annotation
ICBR annotation: serine esterase family protein, putative, expressed
Blast result AT5G51180 : 2.30E-77
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01003576
Strand: +
| Region | Start | End |
| gene | 16691 | 20928 |
| mRNA | 16691 | 20928 |
| exon | 16691 | 17397 |
| exon | 18022 | 18089 |
| exon | 18757 | 18827 |
| exon | 18931 | 19167 |
| exon | 19640 | 19803 |
| exon | 20046 | 20082 |
| exon | 20210 | 20324 |
| exon | 20437 | 20928 |
| CDS | 17276 | 17397 |
| CDS | 18022 | 18089 |
| CDS | 18757 | 18827 |
| CDS | 18931 | 19167 |
| CDS | 19640 | 19803 |
| CDS | 20046 | 20082 |
| CDS | 20210 | 20324 |
| CDS | 20437 | 20534 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05057.13 | DUF676 | 28 | 223 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.