PH01003579G0170's details annotation
1.Annotation
ICBR annotation: antitermination NusB domain-containing protein, putative, expressed
Blast result AT4G26370 : 9.30E-26
Blast annotation: antitermination NusB domain-containing protein
2.Location
Scaffold: PH01003579
Strand: -
| Region | Start | End |
| gene | 132684 | 134663 |
| mRNA | 132684 | 134663 |
| exon | 132684 | 133404 |
| exon | 133667 | 133743 |
| exon | 133823 | 134663 |
| CDS | 133229 | 133404 |
| CDS | 133667 | 133743 |
| CDS | 133823 | 134346 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000928 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor, Aminoacyl-tRNA_biosynthesis Jumonji Transcription_Regulator(from iTAK) translation, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.