PH01003585G0160's details annotation
1.Annotation
ICBR annotation: peroxidase precursor, putative, expressed
Blast result AT5G14130 : 3.10E-92
Blast annotation: Peroxidase superfamily protein
2.Location
Scaffold: PH01003585
Strand: +
| Region | Start | End |
| gene | 128693 | 133102 |
| mRNA | 128693 | 133102 |
| exon | 128693 | 130414 |
| exon | 132000 | 132191 |
| exon | 132287 | 133102 |
| CDS | 130235 | 130414 |
| CDS | 132000 | 132191 |
| CDS | 132287 | 132862 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00141.22 | peroxidase | 31 | 278 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Phenylalanine metabolism | peroxidase [EC:1.11.1.7] | ko00360 | K00430 |
| Phenylpropanoid biosynthesis | peroxidase [EC:1.11.1.7] | ko00940 | K00430 |
| Methane metabolism | peroxidase [EC:1.11.1.7] | ko00680 | K00430 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.