PH01003591G0100's details annotation
1.Annotation
ICBR annotation: ubiquitin-conjugating enzyme, putative, expressed
Blast result AT3G24515 : 2.50E-62
Blast annotation: ubiquitin-conjugating enzyme 37
2.Location
Scaffold: PH01003591
Strand: +
| Region | Start | End |
| gene | 62945 | 66202 |
| mRNA | 62945 | 66202 |
| exon | 62945 | 63698 |
| exon | 63751 | 63886 |
| exon | 63973 | 64078 |
| exon | 64187 | 64285 |
| exon | 64379 | 64501 |
| exon | 64608 | 66202 |
| CDS | 63563 | 63698 |
| CDS | 63751 | 63886 |
| CDS | 63973 | 64078 |
| CDS | 64187 | 64285 |
| CDS | 64379 | 64501 |
| CDS | 64608 | 65699 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00179.25 | UQ_con | 66 | 176 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016881 | acid-amino acid ligase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.