PH01003592G0080's details annotation
1.Annotation
ICBR annotation: CBS domain containing protein, expressed
Blast result AT2G14520 : 1.00E-109
Blast annotation: CBS domain-containing protein with a domain of unknown function (DUF21)
2.Location
Scaffold: PH01003592
Strand: +
| Region | Start | End |
| gene | 63121 | 72869 |
| mRNA | 63121 | 72869 |
| exon | 63121 | 65049 |
| exon | 65146 | 65229 |
| exon | 65314 | 65427 |
| exon | 65519 | 65605 |
| exon | 69093 | 69232 |
| exon | 69865 | 69874 |
| exon | 70139 | 70212 |
| exon | 70747 | 70880 |
| exon | 70993 | 71234 |
| exon | 72035 | 72869 |
| CDS | 65044 | 65049 |
| CDS | 65146 | 65229 |
| CDS | 65314 | 65427 |
| CDS | 65519 | 65605 |
| CDS | 69093 | 69232 |
| CDS | 69865 | 69874 |
| CDS | 70139 | 70212 |
| CDS | 70747 | 70880 |
| CDS | 70993 | 71234 |
| CDS | 72035 | 72067 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01595.19 | DUF21 | 10 | 106 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.