PH01003601G0190's details annotation
1.Annotation
ICBR annotation: 3,4-dihydroxy-2-butanone kinase, putative, expressed
Blast result AT1G48430 : 2.30E-62
Blast annotation: Dihydroxyacetone kinase
2.Location
Scaffold: PH01003601
Strand: +
| Region | Start | End |
| gene | 121633 | 135055 |
| mRNA | 121633 | 135055 |
| exon | 121633 | 123150 |
| exon | 123270 | 124209 |
| exon | 124280 | 125960 |
| exon | 126047 | 126095 |
| exon | 133324 | 133446 |
| exon | 133533 | 133904 |
| exon | 134441 | 135055 |
| CDS | 122878 | 123150 |
| CDS | 123270 | 124209 |
| CDS | 124280 | 125960 |
| CDS | 126047 | 126095 |
| CDS | 133324 | 133446 |
| CDS | 133533 | 133904 |
| CDS | 134441 | 134737 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13355.5 | DUF4101 | 434 | 523 |
| PF05631.13 | MFS_5 | 589 | 704 |
| PF02733.16 | Dak1 | 704 | 864 |
| PF12315.7 | DA1-like | 882 | 929 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004371 | glycerone kinase activity |
| GO:0005524 | ATP binding |
| GO:0006071 | glycerol metabolic process |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.