Annotation of co-expression genes

PH01003618G0060's details annotation

1.Annotation

ICBR annotation: zinc finger family protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01003618
Strand: +

RegionStartEnd
gene4056342110
mRNA4056342110
exon4056341675
exon4199342110
CDS4144541675
CDS4199342088

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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