PH01003652G0040's details annotation
1.Annotation
ICBR annotation: exostosin family protein, putative, expressed
Blast result AT5G03795 : 1.00E-145
Blast annotation: Exostosin family protein
2.Location
Scaffold: PH01003652
Strand: -
| Region | Start | End |
| gene | 31350 | 38379 |
| mRNA | 31350 | 38379 |
| exon | 31350 | 32261 |
| exon | 32439 | 32787 |
| exon | 32910 | 33130 |
| exon | 35251 | 35530 |
| exon | 36076 | 36542 |
| exon | 36631 | 38379 |
| CDS | 31575 | 32261 |
| CDS | 32439 | 32787 |
| CDS | 32910 | 33130 |
| CDS | 35251 | 35530 |
| CDS | 36076 | 36542 |
| CDS | 36631 | 37464 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT47 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03016.14 | Exostosin | 607 | 886 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.