PH01003659G0130's details annotation
1.Annotation
ICBR annotation: OsFBX70 - F-box domain containing protein, expressed
Blast result AT1G80110 : 6.30E-34
Blast annotation: phloem protein 2-B11
2.Location
Scaffold: PH01003659
Strand: -
| Region | Start | End |
| gene | 88437 | 89133 |
| mRNA | 88437 | 89133 |
| exon | 88437 | 89133 |
| CDS | 88510 | 89040 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000345 | WRKY Transcription_Regulator(from PlantTFDB) RLK-Pelle_WAK (from iTAK) |
| coexpression network | CFinderM000612 | photosystem II, extrinsic to membrane, oxygen evolving complex, RLK-Pelle_DLSV (from iTAK) ubiquitin ligase complex, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14299.5 | PP2 | 12 | 183 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.