PH01003676G0090's details annotation
1.Annotation
ICBR annotation: potassium transporter, putative, expressed
Blast result AT4G13420 : 1.00E-155
Blast annotation: high affinity K+ transporter 5
2.Location
Scaffold: PH01003676
Strand: -
| Region | Start | End |
| gene | 36453 | 43455 |
| mRNA | 36453 | 43455 |
| exon | 36453 | 38817 |
| exon | 40692 | 41021 |
| exon | 41694 | 41910 |
| exon | 42339 | 43455 |
| CDS | 36902 | 38817 |
| CDS | 40692 | 41021 |
| CDS | 41694 | 41910 |
| CDS | 42339 | 42521 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000181 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02705.15 | K_trans | 71 | 652 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015079 | potassium ion transmembrane transporter activity |
| GO:0016020 | membrane |
| GO:0071805 | potassium ion transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.