PH01003720G0060's details annotation
1.Annotation
ICBR annotation: potassium channel protein, putative, expressed
Blast result AT4G18160 : 2.00E-70
Blast annotation: Ca2+ activated outward rectifying K+ channel 6
2.Location
Scaffold: PH01003720
Strand: +
| Region | Start | End |
| gene | 64400 | 66581 |
| mRNA | 64400 | 66581 |
| exon | 64400 | 65598 |
| exon | 66400 | 66581 |
| CDS | 64589 | 65598 |
| CDS | 66400 | 66547 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07885.15 | Ion_trans_2 | 108 | 182 |
| PF07885.15 | Ion_trans_2 | 237 | 294 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005267 | potassium channel activity |
| GO:0016020 | membrane |
| GO:0071805 | potassium ion transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.