Annotation of co-expression genes

PH01003808G0060's details annotation

1.Annotation

ICBR annotation: flavin-containing monooxygenase family protein, putative, expressed

Blast result AT1G62620 : 1.00E-147
Blast annotation: Flavin-binding monooxygenase family protein

2.Location

Scaffold: PH01003808
Strand: -

RegionStartEnd
gene4973453082
mRNA4973453082
exon4973450111
exon5025250425
exon5056250697
exon5087350955
exon5111251270
exon5138951459
exon5158453082
CDS4992350111
CDS5025250425
CDS5056250697
CDS5087350955
CDS5111251270
CDS5138951459
CDS5158452097

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction details
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00743.18FMO-like7226
PF00743.18FMO-like246389

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Drug metabolism - cytochrome P450dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.-]ko00982K00485
Methane metabolismdimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.-]ko00680K00485

10.Gene Ontology

GO AccessionGO Annotation
GO:0004499N,N-dimethylaniline monooxygenase activity
GO:0050660flavin adenine dinucleotide binding
GO:0050661NADP binding
GO:0055114oxidation-reduction process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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