Annotation of co-expression genes

PH01003810G0010's details annotation

1.Annotation

ICBR annotation: zinc finger family protein, putative

Blast result AT1G62520 : 1.00E-31
Blast annotation: -

2.Location

Scaffold: PH01003810
Strand: +

RegionStartEnd
gene1357215537
mRNA1357215537
exon1357215537
CDS1406214595

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction details
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0003950NAD+ ADP-ribosyltransferase activity

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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