PH01003812G0050's details annotation
1.Annotation
ICBR annotation: thioredoxin, putative, expressed
Blast result AT2G25950 : 8.90E-62
Blast annotation: Protein of unknown function (DUF1000)
2.Location
Scaffold: PH01003812
Strand: -
| Region | Start | End |
| gene | 35564 | 39754 |
| mRNA | 35564 | 39754 |
| exon | 35564 | 35665 |
| exon | 35852 | 35901 |
| exon | 35984 | 36041 |
| exon | 36156 | 36233 |
| exon | 37071 | 37120 |
| exon | 38108 | 38188 |
| exon | 38575 | 39754 |
| CDS | 35644 | 35665 |
| CDS | 35852 | 35901 |
| CDS | 35984 | 36041 |
| CDS | 36156 | 36233 |
| CDS | 37071 | 37120 |
| CDS | 38108 | 38188 |
| CDS | 38575 | 38658 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06201.12 | PITH | 20 | 134 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.