PH01003830G0170's details annotation
1.Annotation
ICBR annotation: COBRA-like protein precursor, putative, expressed
Blast result AT5G15630 : 1.50E-99
Blast annotation: COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
2.Location
Scaffold: PH01003830
Strand: +
| Region | Start | End |
| gene | 120772 | 128191 |
| mRNA | 120772 | 128191 |
| exon | 120772 | 121207 |
| exon | 121321 | 121400 |
| exon | 121522 | 122024 |
| exon | 127635 | 128191 |
| CDS | 121147 | 121207 |
| CDS | 121321 | 121400 |
| CDS | 121522 | 122024 |
| CDS | 127635 | 127653 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04833.14 | COBRA | 46 | 209 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.