Gene details

Annotation of co-expression genes

PH01003854G0120's details annotation

1.Annotation

ICBR annotation: zinc finger family protein, putative, expressed

Blast result AT4G15080 : 1.00E-146
Blast annotation: DHHC-type zinc finger family protein

2.Location

Scaffold: PH01003854
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000504	cytoplasm, microtubule associated complex, Pyruvate_metabolism Fatty_acid_biosynthesis Glycine,_serine_and_threonine_metabolism Valine,_leucine_and_isoleucine_degradation
coexpression network	CFinderM001573	protein refolding, histone_lysine_methylation cellular protein metabolic process, histone_binding zinc ion binding, histone-lysine N-methyltransferase activity, C2H2 Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00118.23	Cpn60_TCP1	725	1150

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005524	ATP binding
GO:0005737	cytoplasm
GO:0008270	zinc ion binding
GO:0042026	protein refolding
GO:0044267	cellular protein metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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