Gene details

Annotation of co-expression genes

PH01003930G0110's details annotation

1.Annotation

ICBR annotation: retinoblastoma-binding protein-like, putative, expressed

Blast result AT3G21060 : 9.00E-172
Blast annotation: Transducin/WD40 repeat-like superfamily protein

2.Location

Scaffold: PH01003930
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000787	TKL-Pl-3 (from iTAK) RLK-Pelle_LRR-II (from iTAK) RNA-directed RNA polymerase activity, protein phosphorylation,
coexpression network	CFinderM001205	ribonucleoside_binding transcription, DNA-dependent, DNA-directed RNA polymerase activity, Drug_metabolism_-_cytochrome_P450 Metabolism_of_xenobiotics_by_cytochrome_P450 Glutathione_metabolism
coexpression network	CFinderM001625	SNF2 Transcription_Regulator(from iTAK) cellular_homeostasis mitochondrial outer membrane, RNA methylation, Homologous_recombination
coexpression network	CFinderM001758	nuclear pore, MYB-related Transcription_Regulator(from iTAK) MYB_related Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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