Gene details

Annotation of co-expression genes

PH01003949G0090's details annotation

1.Annotation

ICBR annotation: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed

Blast result AT1G17720 : 0
Blast annotation: Protein phosphatase 2A, regulatory subunit PR55

2.Location

Scaffold: PH01003949
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000492	SCY1_SCYL1 (from iTAK) RLK-Pelle_RLCK-IXb (from iTAK) SWI/SNF-BAF60b Transcription_Regulator(from iTAK) protein binding, protein phosphatase type 2A complex,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00400.31	WD40	223	259

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000159	protein phosphatase type 2A complex
GO:0005515	protein binding
GO:0007165	signal transduction
GO:0008601	protein phosphatase type 2A regulator activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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