PH01004121G0010's details annotation
1.Annotation
ICBR annotation: calcium-transporting ATPase 2, endoplasmic reticulum-type, putative, expressed
Blast result AT1G07810 : 9.50E-73
Blast annotation: ER-type Ca2+-ATPase 1
2.Location
Scaffold: PH01004121
Strand: +
| Region | Start | End |
| gene | 150 | 1367 |
| mRNA | 150 | 1367 |
| exon | 150 | 1367 |
| CDS | 150 | 725 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00689.20 | Cation_ATPase_C | 2 | 172 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006812 | cation transport |
| GO:0016021 | integral to membrane |
| GO:0019829 | cation-transporting ATPase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.