PH01004134G0130's details annotation
1.Annotation
ICBR annotation: glucan endo-1,3-beta-glucosidase-related, putative, expressed
Blast result AT2G30933 : 2.80E-34
Blast annotation: Carbohydrate-binding X8 domain superfamily protein
2.Location
Scaffold: PH01004134
Strand: +
| Region | Start | End |
| gene | 101675 | 104726 |
| mRNA | 101675 | 104726 |
| exon | 101675 | 102251 |
| exon | 103623 | 104243 |
| exon | 104337 | 104382 |
| exon | 104465 | 104726 |
| CDS | 102179 | 102251 |
| CDS | 103623 | 104243 |
| CDS | 104337 | 104382 |
| CDS | 104465 | 104723 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07983.12 | X8 | 155 | 225 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.