PH01004290G0030's details annotation
1.Annotation
ICBR annotation: double-stranded RNA binding motif containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01004290
Strand: -
| Region | Start | End |
| gene | 11144 | 19514 |
| mRNA | 11144 | 19514 |
| exon | 11144 | 11375 |
| exon | 11694 | 11854 |
| exon | 12395 | 12443 |
| exon | 14850 | 15550 |
| exon | 15679 | 15895 |
| exon | 16658 | 16923 |
| exon | 18343 | 19514 |
| CDS | 11277 | 11375 |
| CDS | 11694 | 11854 |
| CDS | 12395 | 12443 |
| CDS | 14850 | 15550 |
| CDS | 15679 | 15895 |
| CDS | 16658 | 16923 |
| CDS | 18343 | 18424 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00035.25 | dsrm | 33 | 98 |
| PF00035.25 | dsrm | 122 | 185 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003725 | double-stranded RNA binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.