PH01004297G0090's details annotation
1.Annotation
ICBR annotation: peptidyl-prolyl cis-trans isomerase, putative, expressed
Blast result AT3G62030 : 2.60E-56
Blast annotation: rotamase CYP 4
2.Location
Scaffold: PH01004297
Strand: +
| Region | Start | End |
| gene | 90799 | 97366 |
| mRNA | 90799 | 97366 |
| exon | 90799 | 93957 |
| exon | 94064 | 94208 |
| exon | 94373 | 94461 |
| exon | 96148 | 96202 |
| exon | 96640 | 96725 |
| exon | 96788 | 97366 |
| CDS | 93769 | 93957 |
| CDS | 94064 | 94208 |
| CDS | 94373 | 94461 |
| CDS | 96148 | 96202 |
| CDS | 96640 | 96725 |
| CDS | 96788 | 96865 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00160.20 | Pro_isomerase | 78 | 188 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
| GO:0006457 | protein folding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.