Gene details

Annotation of co-expression genes

PH01004342G0110's details annotation

1.Annotation

ICBR annotation: phosphoenolpyruvate carboxylase, putative, expressed

Blast result AT1G53310 : 0.00E+00
Blast annotation: phosphoenolpyruvate carboxylase 1

2.Location

Scaffold: PH01004342
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000180	transmembrane transport, integral to membrane, CAMK_AMPK (from iTAK) GH100 Glycoside_Hydrolases GH32 Glycoside_Hydrolases Golgi membrane,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00311.16	PEPcase	167	969

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Pyruvate metabolism	phosphoenolpyruvate carboxylase [EC:4.1.1.31]	ko00620	K01595
Carbon fixation in photosynthetic organisms	phosphoenolpyruvate carboxylase [EC:4.1.1.31]	ko00710	K01595
Carbon fixation pathways in prokaryotes	phosphoenolpyruvate carboxylase [EC:4.1.1.31]	ko00720	K01595
Methane metabolism	phosphoenolpyruvate carboxylase [EC:4.1.1.31]	ko00680	K01595

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0006099	tricarboxylic acid cycle
GO:0008964	phosphoenolpyruvate carboxylase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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